The GARCH functionality in the econometric toolbox in Matlab is trying to be too clever, but can't deliver and could well be buggy. If you want to try that, here are the docs (estimate). Besides, it can only do univariate GARCH and so can't be used in Chapter 3. Kevin Sheppard's MFE toolbox is much better, while not as user friendly, it is much better written and is certainly more comprehensive. It can be downloaded here and the documentation here is quite detailed.
p = csvread('index.csv', 1, 0);
y=diff(log(p))*100;
y=y-mean(y);
%% We multiply returns by 100 and de-mean them
tarch(y,1,0,0); % ARCH(1)
tarch(y,4,0,0); % ARCH(4)
tarch(y,4,0,1); % GARCH(4,1)
tarch(y,1,0,1); % GARCH(1,1)
tarch(y,1,0,1,'STUDENTST'); % t-GARCH(1,1)
import numpy as np
p = np.loadtxt('index.csv', delimiter = ',', skiprows = 1)
y = np.diff(np.log(p), n=1, axis=0)*100
y = y-np.mean(y)
from arch import arch_model
## using Kevin Sheppard's ARCH package for Python
## ARCH(1)
am = arch_model(y, mean = 'Zero', vol='Garch', p=1, o=0, q=0, dist='Normal')
am.fit(update_freq=5)
## ARCH(4)
am = arch_model(y, mean = 'Zero', vol='Garch', p=4, o=0, q=0, dist='Normal')
am.fit(update_freq=5)
## GARCH(4,1)
am = arch_model(y, mean = 'Zero', vol='Garch', p=4, o=0, q=1, dist='Normal')
am.fit(update_freq=5)
## GARCH(1,1)
am = arch_model(y, mean = 'Zero', vol='Garch', p=1, o=0, q=1, dist='Normal')
am.fit(update_freq=5)
## t-GARCH(1,1)
am = arch_model(y, mean = 'Zero', vol='Garch', p=1, o=0, q=1, dist='StudentsT')
am.fit(update_freq=5)
## comment out all the lines except one to see its output
aparch(y,1,1,1); % APARCH(1,1)
aparch(y,2,2,1); % APARCH(2,1)
aparch(y,1,1,1,'STUDENTST'); % t-APARCH(1,1)
## Python does not have a proper APARCH package at present
## To be introduced in scikits.statsmodels